BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E06SP1|AL429754
(600 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1619 1156 0.0
>3x_Contig1619
Length = 7770
Score = 1156 bits (578), Expect = 0.0
Identities = 590/600 (98%)
Strand = Plus / Plus
Query: 1 atattcttattataatattatatttttmatacttataatgggacttgaacctatatactt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5404 atattcttattataatattatatttttaatacttataatgggacttgaacctatatactt 5463
Query: 61 cgcttatgagacgaatgttttaaccaattaaactatacaagttattatatatttatataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5464 cgcttatgagacgaatgttttaaccaattaaactatacaagttattatatatttatataa 5523
Query: 121 tagtataavaktacctaatatttattaagtaatttcccgcggtcacctcccttcgggggg 180
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5524 tagtataaaattacctaatatttattaagtaatttcccgcggtcacctcccttcgggggg 5583
Query: 181 tgccgcgggtagatattaatttatataagccccaaatgcatcatccctatgaggatgtcg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5584 tgccgcgggtagatattaatttatataagccccaaatgcatcatccctatgaggatgtcg 5643
Query: 241 catttggggcaaagggtgaatactgagaattgaactcagvtttaacgcgccacaagcatt 300
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5644 catttggggcaaagggtgaatactgagaattgaactcagatttaacgcgccacaagcatt 5703
Query: 301 ctttctacctttgaaatatattcacctataattatatatvanantatagaaaaatgaacg 360
||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 5704 ctttctacctttgaaatatattcacctataattatatataaaaatatagaaaaatgaacg 5763
Query: 361 gaaaatatgagagtcgaactcataagaacatagttcaattatgtagcaaataatctacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5764 gaaaatatgagagtcgaactcataagaacatagttcaattatgtagcaaataatctacct 5823
Query: 421 taccaatagtgaattttcctattacgaatctaatcagacttgcactgacatcaaccatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5824 taccaatagtgaattttcctattacgaatctaatcagacttgcactgacatcaaccatcg 5883
Query: 481 tgacaagatgggactttactattaagctacagatccattatataattktvctgtgtatcc 540
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 5884 tgacaagatgggactttactattaagctacagatccattatataattttactgtgtatcc 5943
Query: 541 ttaaaaaaaaattaagtacaggattatcaaaattaatatavcccgccaatttatataata 600
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5944 ttaaaaaaaaattaagtacaggattatcaaaattaatataacccgccaatttatataata 6003
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5058
Number of Sequences: 1807
Number of extensions: 5058
Number of successful extensions: 144
Number of sequences better than 1.0e-20: 1
length of query: 600
length of database: 10,358,551
effective HSP length: 16
effective length of query: 584
effective length of database: 10,329,639
effective search space: 6032509176
effective search space used: 6032509176
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)